I am in the same situation. Originally submitted my application on 7/2. Had to be finger printed again in mid August and still waiting. Getting close to 2 months after being finger printed the second time.
I don't know if they start the clock all over again when they receive the second set of finger prints or not. Does anyone know?
unfortunatly the way i understand it is that the prints are step 1 and if they don't pass everything goes on hold until they get good ones back.